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QuickBooks vs. Microsoft Dynamics 365 Business Central: A Smart Upgrade for Growing Businesses

Updated: Apr 28

Why Upgrading from QuickBooks to Business Central Is a Smart Move
Why Upgrading from QuickBooks to Business Central Is a Smart Move

Small and mid-sized companies often start with QuickBooks (Online or Desktop) because it’s easy and affordable. But as your business grows, you may run into QuickBooks limitations – like handling more transactions, managing inventory across multiple locations, or generating advanced reports. In fact, Microsoft notes that many growing businesses “are changing from finance apps like QuickBooks Desktop and QuickBooks Online… to Business Central,” since QuickBooks is built for startups and smaller firms, while Business Central “also supports larger, more complex organizations”​learn.microsoft.com. In this blog, we’ll explain why moving from QuickBooks to Microsoft Dynamics 365 Business Central makes sense for expanding businesses, illustrate easy-to-understand examples of the benefits, outline steps for a smooth QuickBooks to Business Central migration, and show how professional ERP implementation services like Axtegrity Consulting can help the process.

QuickBooks Limitations for Growing Companies

QuickBooks is popular for small businesses because it’s simple. But that simplicity comes with limits. As you add customers, products, or branches, you may find QuickBooks can’t keep up. Some common QuickBooks limitations include:

  • Basic accounting only.  QuickBooks handles core finance functions (invoicing, expense tracking, bank reconciliation), but it isn’t a full ERP system. It lacks built-in modules for inventory management, manufacturing, multi-warehouse operations, or complex project accounting. In QuickBooks, you often have to juggle spreadsheets or third-party add-ons to manage these needs. As one analyst notes, “QuickBooks lacks the comprehensive ERP capabilities of Business Central,” so businesses needing advanced supply chain or project management may find QuickBooks insufficient​ngenioussolutions.com.

  • Limited scalability.  QuickBooks can slow down or run into file-size limits as your data grows. For example, QuickBooks Desktop caps the total number of customers, vendors, and items in the list (around 14,500 combined) and QuickBooks Online caps accounts at 250. When a company grows past these thresholds, entering more records can cause errors. NGenious Solutions observes that “as organizations grow, they may encounter challenges with QuickBooks’ ability to handle increased transaction volumes and complex workflows,” leading to inefficiencies​. In contrast, Business Central is designed to handle thousands of transactions per day without bogging down.

  • Basic reporting and analytics.  QuickBooks provides standard profit & loss, balance sheet, and cash flow reports, but few advanced insights. If you need customizable dashboards or industry-specific metrics, you’ll need extra tools. Business Central, on the other hand, has built-in dashboards and works natively with Power BI for deep analytics (see next section).

  • Limited integrations and customization.  QuickBooks offers some integrations, but they are often basic. For example, its email/Outlook integration and Excel export are helpful, but it won’t tie together all your systems. Business Central “offers advanced integration possibilities, connecting seamlessly with various Microsoft applications and other third-party solutions,” creating a unified ecosystem​.

  • Single-company, single-region focus.  QuickBooks company files usually serve one legal entity in one country with one currency. If you run multiple companies, operate in multiple countries, or need multiple currencies, QuickBooks can be cumbersome. Business Central, by contrast, supports multiple companies (and consolidations), multiple currencies, and even dozens of languages in one system​​.

Because of these QuickBooks limitations, many growing businesses feel “boxed in” by QuickBooks. If you recognize these pains – e.g. manual inventory tracking, occasional crashes, or painful month-end close – it may be time to consider a more powerful solution.

Why Upgrade to Microsoft Dynamics 365 Business Central. A QuickBooks vs Microsoft 365 Dynamics Business Central question.

Microsoft Dynamics 365 Business Central is a cloud-based (or on-premises) ERP solution built for small and medium businesses that need to scale. It provides a single system to manage finance, inventory, sales, purchasing, project jobs, and more. Key advantages include:

  • All-in-one ERP functionality.  Business Central “functions as an all-in-one ERP solution, offering extensive modules for finance, supply chain management, sales, project management, and customer service”​. In other words, instead of needing separate apps (accounting software + inventory system + CRM, etc.), Business Central brings everything together. This integration eliminates data silos: your sales orders feed inventory and financials automatically, and vice versa.

  • Built for growth and scalability.  Unlike QuickBooks, Business Central is designed to grow with you. It “scales effectively as companies expand” and can accommodate increased transaction volumes and complexity​. You can add users easily (no artificial limit on users like some QuickBooks plans) and extend functionality with new modules or custom apps when needed.

  • Advanced reporting and business intelligence.  Business Central includes real-time dashboards and reporting tools, and natively connects with Power BI for sophisticated analytics. You can customize reports and dashboards to display KPIs (e.g. profitability by product line, or aging receivables) at the click of a button​. For example, instead of pulling data into Excel manually, you can create a Power BI dashboard that shows sales vs. budget for all regions instantly.

  • Integration with Microsoft 365 and other tools.  Because Business Central is a Microsoft product, it integrates tightly with Office 365 apps like Outlook, Excel, Teams, and Power BI. You can invoice customers directly from Outlook emails, publish reports to Teams channels, or edit Business Central data in Excel with one click. This seamless connectivity boosts productivity.

  • Flexible deployment and access.  Business Central can be run in the cloud (Microsoft’s servers) or on-premises in your own data center, or a mix of both (hybrid). It can also be accessed from any device with a browser or mobile app. This flexibility ensures it works with your IT strategy and allows staff to work remotely if needed.

  • Modern user experience.  The interface is user-friendly and customizable – you can personalize dashboards and views for each role. It also follows Microsoft design patterns, so it will feel familiar to users of Outlook or other Microsoft apps.

In short, Business Central is a full ERP solution (finance + operations) rather than just accounting software. It’s especially well-suited for companies that have outgrown QuickBooks’ capabilities and need more advanced features. Microsoft emphasizes that Business Central is ideal for growing companies requiring a comprehensive solution, while QuickBooks remains a good fit for very small businesses focusing on basic accounting​.

Real-World Examples: How Migrating Helps Businesses

To see the value more concretely of QuickBooks vs Microsoft 365 Dynamics Business Central topic, let’s look at some easy-to-follow examples of QuickBooks users benefiting from Business Central.

  • Multi-Location Retailer or Wholesaler.  Imagine a business that started with one store and sells products online. In QuickBooks, the owner has to manually track stock levels in each location (maybe using spreadsheets). When a product sells in one store, they need to adjust inventory in another. Business Central automates this: it knows the inventory at each location and updates quantities automatically as sales and purchases happen. The system can even reorder products based on preset reorder points. This means less human error and never running out of popular items.

  • Growing Service Firm with Projects.  Consider a consulting company that has projects for multiple clients. QuickBooks might let you tag expenses to projects, but it can’t easily compare budgeted vs. actual time and costs in real time. In Business Central, you can set up detailed job costing: track all hours, expenses, and invoices by project. You get instant visibility into project profitability. For example, if a job is running over budget, managers get alerts and can adjust resources or billing. Reporting on client profitability or project margins becomes simple.

  • Manufacturing or Assembly Business.  A small manufacturer using QuickBooks might struggle to coordinate production schedules, bill of materials (BOMs), and raw-material inventory. Business Central includes basic manufacturing capabilities: you can define BOMs for products, plan production orders, and see the availability of parts. When a customer order comes in, the system can suggest purchasing missing components or creating production orders automatically. This keeps shop floor staff and management on the same page without juggling separate spreadsheets.

  • International Company (Multi-currency).  If your business has customers or vendors overseas, you need to deal with multiple currencies and exchange rates. QuickBooks Desktop has a multi-currency version, but QuickBooks Online’s multi-currency support is limited to some countries. Business Central fully supports unlimited currencies and automates revaluation of foreign balances. You can issue invoices in any currency, pay vendors in local currency, and Business Central will handle the conversions. It also lets you consolidate multiple subsidiaries in different countries into a single set of financial reports.

  • Data and BI-Driven Decision Making.  Finally, consider that in QuickBooks you might need to export data to Excel or third-party tools to analyze trends. With Business Central’s built-in Power BI integration, you can have up-to-date dashboards showing sales trends, cash flow forecasts, and key metrics on your phone or in a browser. This empowers business owners and managers to make informed decisions faster.

Each of these examples shows how QuickBooks users gain concrete advantages by moving to Business Central. You keep all your core QuickBooks functionality (invoicing, payroll, etc.) and add the bigger-picture tools needed for growth.

Steps for a Smooth QuickBooks-to-Business Central Migration

Migrating from QuickBooks to Business Central is a big step, but with the right process it can be smooth. Think of it like moving house: careful planning, packing the right boxes, and not rushing the move will save headaches. Here are key steps to ease the data migration and implementation:

  1. Assess and Plan.  Start with a thorough review of your QuickBooks setup and business processes. What data do you have (customers, vendors, products, chart of accounts, balances)? What workflows in QuickBooks (invoicing, payments, reporting) are critical? Define your goals: do you want to automate inventory, improve reporting, handle multi-currency, etc.? Identify any gaps or data cleanup needs (see next step). A clear plan and timeline will guide the project.

  2. Data Cleanup and Preparation.  As Addend Analytics notes, “Data is the lifeblood of any business system,” so cleaning and organizing your QuickBooks data is crucial​. Before importing, remove duplicate or inactive records. Reconcile accounts and clear old unresolved transactions. Make sure your customers, vendors, items, and chart of accounts are accurate. This decluttering is like tidying up before a big move – it prevents problems later. Address things like missing information, inconsistent naming, or incorrect balances.

  3. Configure Business Central.  Set up Business Central to match your business requirements. This may involve choosing which modules you need (e.g. inventory, projects, manufacturing), setting up companies or legal entities, defining account structures, and configuring tax codes. It’s like setting up furniture in your new home: arrange each room (module) to suit your lifestyle. Here you also decide on user permissions, workflows, and any customizations (e.g. custom fields or extensions).

  4. Use Migration Tools and Services.  Microsoft provides a QuickBooks Data Migration extension to import key data into Business Central​learn.microsoft.com. This tool can transfer customers, vendors, items, and chart of account lists from QuickBooks Desktop or Online automatically. If you have complex data or need to bring over historical transactions, you might use specialized data migration services. Experienced partners (like Axtegrity Consulting) have tools and best practices to map and import data accurately. They’ll ensure things like open invoices, account balances, and inventory on hand move over correctly.

  5. Test the Migration.  Before going live, run a trial import into a test environment. Compare reports and balances in Business Central against your QuickBooks data to confirm everything transferred correctly. Look for missing transactions or misaligned accounts. This is your “test drive” of the new system​ – it catches issues before real work starts in Business Central.

  6. Train Your Team.  One of the biggest hurdles is getting everyone comfortable with the new system. Schedule training sessions so your staff learns how to enter transactions, run reports, and use any new features (like mobile apps or dashboards). Encourage hands-on practice. Prepare quick reference guides or record short video tutorials. Remember, it’s like teaching someone to drive a new car, they need to feel confident behind the wheel. A consulting partner can provide training and support here.

  7. Go Live and Support.  Once testing is complete and your team is ready, plan the go-live date. Make sure your cutover plan (closing out QuickBooks, starting fresh in Business Central on day one) is clear. After going live, have support available to address any questions or glitches that arise. Experienced ERP implementation services often include a post-launch support period to fix minor issues and answer user queries.

Following these steps – especially with professional guidance – makes the transition from QuickBooks to Business Central much easier. You’ll minimize downtime and ensure that your data is accurate in the new system.

Partner with Axtegrity Consulting for a Smooth Migration

Making the switch from QuickBooks to a full ERP like Business Central is a big move, but you don’t have to do it alone. Axtegrity Consulting specializes in ERP implementation services and data migrations for small to mid-sized businesses. We understand the headaches of QuickBooks limitations, and we know how to make Business Central work for you.

Our team can guide you through every step:

  • Planning: We’ll help define your goals and map your current QuickBooks setup to Business Central.

  • Data Migration Services: Using Microsoft’s QuickBooks Data Migration tools and our in-house expertise, we’ll ensure customers, vendors, inventory, and financial data transfer smoothly into Dynamics 365​learn.microsoft.comaddendanalytics.com.

  • Customization and Integration: Need to configure Business Central to mirror your processes? We can customize the system, integrate it with Microsoft 365 apps, and connect any other tools your business uses.

  • Training and Support: We provide training for your staff so they quickly get up to speed, plus ongoing support to handle any issues after go-live.


With Axtegrity as your partner, you’ll avoid common pitfalls and save time. We’ve helped many former QuickBooks users streamline their operations and unlock new productivity with Business Central.


Ready to Upgrade? If your business is hitting the limits of QuickBooks, now is the time to act. Upgrading to Microsoft Dynamics 365 Business Central brings better inventory control, robust reporting, and the ability to scale with confidence. Contact Axtegrity Consulting today to discuss your QuickBooks-to-Business Central migration. Our experts can perform a free assessment of your needs and demonstrate how Business Central and our ERP implementation services will transform your finance and operations. Let’s take the next step together – reach out to Axtegrity Consulting and make your move from QuickBooks a seamless success!


Contact Axtegrity Consulting to learn more about QuickBooks to Business Central migration and how our ERP implementation services can help your business grow.

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